Biophysics - Organics Articles ... Charge transport properties of ideal and natural DNA segments, as mutation detectors M. Mantela, K. Lambropoulos, C. Simserides* Physical Chemistry Chemical Physics 25 (2023) 7750-7762 doi: 10.1039/D3CP00268C Energy Transport along α-Helix Protein Chains: External Drives and Multifractal Analysis N. Sefidkar, S. Fathizadeh*, F. Nemati, C. Simserides Materials 15 (2022) 2779 (13 pages) doi: 10.3390/ma15082779 Cyclo[18]carbon including Zero-Point Motion: Ground State, First Singlet and Triplet Excitations, and Hole Transfer K. Lambropoulos*, A. M. Alvertis, A. Morphis, C. Simserides Physical Chemistry Chemical Physics 24 (2022) 7779-7787 doi: 10.1039/D2CP00343K LCAO electronic structure of nucleic acid bases and other heterocycles and transfer integrals in B-DNA, including structural variability M. Mantela, C. Simserides*, R. Di Felice* Materials 14 (2021) 4930 (20 pages) doi: 10.3390/ma14174930 Effects of structural dynamics on charge carrier transfer in B-DNA: a combined MD and RT-TDDFT study M. Mantela, A. Morphis, K. Lambropoulos, C. Simserides*, R. Di Felice* The Journal of Physical Chemistry B 125 (2021) 3986-4003 doi: 10.1021/acs.jpcb.0c11489 Hole transfer in open carbynes C. Simserides*, A. Morphis, K. Lambropoulos Materials 13 (2020) 3979 (24 pages) doi: 10.3390/ma13183979 Hole Transfer in Cumulenic and Polyynic Carbynes C. Simserides*, A. Morphis, K. Lambropoulos The Journal of Physical Chemistry 124 (2020) 12834−12849 doi: 10.1021/acs.jpcc.0c03763 Tight-Binding modeling of nucleic acid sequences: interplay between various types of order or disorder and charge transport K. Lambropoulos* and C. Simserides* Symmetry 11 (2019) 968 (26 pages) doi: 10.3390/sym11080968 Invited Review to the special issue of Symmetry, Symmetry and Asymmetry in Quasicrystals or Amorphous Materials, with guest Editor Enrique Macia. Quasi-periodic and fractal polymers: Energy structure and carrier transfer M. Mantela, K. Lambropoulos, M. Theodorakou, C. Simserides* Materials 12 (2019), 2177 (30 pages) doi: 10.3390/ma12132177 Periodic, quasiperiodic, fractal, Kolakoski, and random binary polymers: Energy structure and carrier transport K. Lambropoulos and C. Simserides* Physical Review E 99 (2019) 032415 (17 pages) doi: 10.1103/PhysRevE.99.032415 Academy of Athens, Lycurgus Award, 2022, for original research in Theoretical Physics. Periodic polymers with increasing repetition unit: Energy structure and carrier transfer K. Lambropoulos, C. Vantaraki, P. Bilia, M. Mantela, C. Simserides* Physical Review E 98 (2018) 032412 (14 pages + 23 pages Supplemental Material) doi: 10.1103/PhysRevE.98.032412 Spectral and transmission properties of periodic 1D Tight-Binding lattices with a generic unit cell: an analysis within the transfer matrix approach K. Lambropoulos* and C. Simserides* Journal of Physics Communications 2 (2018) 035013 (19 pages) doi: 10.1088/2399-6528/aab065 Electronic structure and charge transport properties of atomic carbon wires K. Lambropoulos and C. Simserides* Physical Chemistry Chemical Physics 19 (2017) 26890 - 26897 doi: 10.1039/c7cp05134d MOVIE: hole oscillations within the AT dimer produced by RT-TDDFT MOVIE: hole oscillations within the GA dimer produced by RT-TDDFT RT-TDDFT study of hole oscillations in B-DNA monomers and dimers M. Tassi*, A. Morphis, K. Lambropoulos, C. Simserides Cogent Physics 4 (2017) 1361077 (12 pages) doi: 10.1080/23311940.2017.1361077 Electronic structure and carrier transfer in B-DNA monomer polymers and dimer polymers: Stationary and time-dependent aspects of wire model vs. extended ladder model K. Lambropoulos, M. Chatzieleftheriou, A. Morphis, K. Kaklamanis, R. Lopp, M. Theodorakou, M. Tassi, C. Simserides* Physical Review E 94 (2016) 062403 (22 pages) doi: 10.1103/PhysRevE.94.062403 Wire and extended ladder model predict THz oscillations in DNA monomers, dimers and trimers K. Lambropoulos, K. Kaklamanis, A. Morphis, M. Tassi, R. Lopp, G. Georgiadis, M. Theodorakou, M. Chatzieleftheriou, C. Simserides* Journal of Physics: Condensed Matter 28 (2016) 495101 (19 pages) doi: 10.1088/0953-8984/28/49/495101 Lowest ionization and excitation energies of biologically important heterocyclic planar molecules M. Mantela, A. Morphis, M. Tassi, C. Simserides* Molecular Physics 114 (2016) 709-718 doi: 10.1080/00268976.2015.1113313 Unbiased charge oscillations in DNA monomer polymers and dimer polymers K. Lambropoulos, M. Chatzieleftheriou, A. Morphis, K. Kaklamanis, M. Theodorakou, C. Simserides* Physical Review E 92 (2015) 032725 (16 pages) doi: 10.1103/PhysRevE.92.032725 THz and above THz electron or hole oscillations in DNA dimers and trimers K. Lambropoulos, K. Kaklamanis, G. Georgiadis, C. Simserides* Annalen der Physik (Berlin) 526 (2014) 249–258 doi: 10.1002/andp.20140006A7 A systematic study of electron or hole transfer along DNA dimers, trimers and polymers C. Simserides* Chemical Physics 440 (2014) 31-41 doi: 10.1016/j.chemphys.2014.05.024 Density of states and extent of wave function: two crucial factors for small polaron hopping conductivity in 1D M. Dimakogianni, C. Simserides*, G. P. Triberis Philosophical Magazine, 93 (2013) 2729-2748 doi: 10.1080/14786435.2013.785639 Academy of Athens Georgios Th. Foteinos Award, 2014, for original research in Experimental or Theoretical Physics. Electronic parameters for charge transfer along DNA L. G. D. Hawke, G. Kalosakas*, C. Simserides European Physical Jouranl E 032 (2010) 291–305 doi: 10.1140/epje/i2010-10650-y Empirical LCAO parameters for p molecular orbitals in planar organic molecules L. G. D. Hawke, G. Kalosakas*, C. Simserides Molecular Physics 107 (2009) 1755–1771 doi: 10.1080/00268970903049089 The π-π* molecular structure of flavin of FADH- enzymatic cofactor using the LCAO method L. G. D. Hawke, C. Simserides*, G. Kalosakas Materials Science and Engineering B 165 (2009) 266–269 doi: 10.1016/j.mseb.2009.02.012 Effects of the task of categorizing FM direction on auditory evoked magnetic fields in the human auditory cortex R. Koenig, C. Sielużycki*, C. Simserides, P. Heil, H. Scheich Brain Research 1220 (2008) 102-117 doi: 10.1016/j.brainres.2008.02.086 A small polaron hopping model for multiphonon-assisted transport along DNA molecules, in the presence of disorder G. Triberis, C. Simserides*, V. Karavolas Physica E: Low-dimensional Systems and Nanostructures 32 (2006) 592–595 doi: 10.1016/j.physe.2005.12.111 Small polaron hopping transport along DNA molecules G. P. Triberis*, C. Simserides, V. C. Karavolas J. Phys.: Condens. Matter 17 (2005) 2681-2690 doi: 10.1088/0953-8984/17/17/016 Proceedings ... Proceedings of ANBRE21 (Arch Eng, Nano, Bio, Robotics & Energy). The 2021 International Conference on Advances in Biomaterials and Biomechanics in Bioengineering (ICBME21), Seoul National University, Korea, August 23-26, 2021. C. Simserides*, A. Morphis, K. Lambropoulos. Hole Transfer in Open Cumulenic and Polyynic Carbyne Chains. Frequency Content of Carrier Oscillations along B-DNA Aperiodic and Periodic Polymers M. Mantela, K. Lambropoulos, C. Vantaraki, P. Bilia, A. Morphis, C. Simserides* PIERS (PhotonIcs and Electromagnetics Research Symposium, aka Progress In Electromagnetics Research Symposium), 17-20 June 2019, Rome, Italy. pp. 831-838, doi: 10.1109/PIERS-Spring46901.2019.9017899 URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=9017899&isnumber=9017213 Honorable Mention Student Paper (Antennas & Microwave Technologies) for M. Mantela Frequency Content of Carrier Oscillations along B-DNA Polymers K. Lambropoulos, M. Mantela, C. Simserides* PIERS (Progress in Electromagnetics Research Symposium) Proceedings, 19- 22 November 2017, Singapore. Volume 2018-November, 2018, Pages 186-193. doi: 10.1109/PIERS-FALL.2017.8293134 THz oscillations in DNA monomers, dimers and trimers K. Lambropoulos, K. Kaklamanis, G. Georgiadis, M. Theodorakou, M. Chatzieleftheriou, M. Tassi, A. Morphis, C. Simserides* PIERS (Progress in Electromagnetics Research Symposium) Proceedings, 6-9 July 2015, Prague, pp 879-833 Best Student Paper Award (Optics and Photonics) for K. Lambropoulos The effect of a categorical discrimination task on the auditory M100 peak latency R. König*, C. Sielużycki, C. Simserides, H. Scheich, International Congress Series 1300 (2007) 45-48 doi: 10.1016/j.ics.2007.01.062 Proceedings of BIOMAG 2006 (15th International Conference on Biomagnetism) High temperature electrical conductivity due to small polaron hopping motion in DNA molecules G. P. Triberis*, V. C. Karavolas, C. Simserides Journal of Physics: Conference Series 10 (2005) 210–213 (with referee) doi: 10.1088/1742-6596/10/1/052 Proceedings of the 2nd Conf. on Microelectronics, Microsystems and Nanotechnology 2004 Do stimuli or tasks determine lateralized auditory cortex responses? An MEG study C. Sielużycki, R. König, C. Simserides, H. Scheich International Journal of Bioelectromagnetism, IJBEM 7 (2005) 185-188 [Proceedings of the Joint Meeting of 5th International Conference on Bioelectromagnetism and 5th International Symposium on Noninvasive Functional Source Imaging within the Human Brain and Heart (BEM & NFSI), University of Minnesota, Twin Cities campus in Minneapolis, Minnesota, USA, 12-15/5/2005]. An MEG study of directional categorization of frequency-modulated tones C. Simserides, R. König, and H. Scheich Proceedings of the 14th International Conference on Biomagnetism (BIOMAG 2004), E. Halgren, S. Ahlfors, M. Hämäläinen, and D. Cohen (eds.), pp. 543-544. Boston: Biomag 2004 Ltd. Task-dependent activation of the auditory cortex by frequency-modulated tones: an MEG study C. Simserides*, R. König, and H. Scheich Biomedizinische Technik 48 (2004) 205-207 (with referee) Proceedings of NFSI-2003 (4th International Symposium on Nonivasive Functional Source Imaging) Auditory Cortex Response to Frequency-Modulated Tones Investigated with MEG R. König, C. Simserides, and H. Scheich Proceedings of the International Conference on Auditory Cortex, Shaker Verlag, Aachen, Germany (2003) p.30 (13-17 September 2003, Magdeburg, Germany) Tight-binding parameters for charge transport in DNA, L. G. D. Hawke, G. Kalosakas, C. Simserides 5th Conference of the Hellenic Society for Computational Biology and Bioinformatics, 17-19 October 2010, Alexandroupolis, Greece A few related older presentations ... Progress in Electromagnetics Research Symposium (PIERS 2017), 19- 22 November 2017, Nanyang Technological University, Singapore. Two TB Approaches (a Wire Model and an Extended Ladder Model) as Well as RT-TDDFT, Predict THz Oscillations in DNA Monomers, Dimers and Trimers. and Frequency Content of Carrier Oscillations along B-DNA Polymers. Mediterranean Institute of Fundamental Physics (MIFP), March Meeting 2017, 8-11 March 2017, Castelli Romani, Rome, Hotel Helio Cabala. Charge transfer - THz oscillations in DNA segments EMN Open Access Week (2014) Chengdu Systematic study of carrier transfer in DNA polymers NN14 (2014) Thessaloniki THz and above THz electron or hole oscillations in DNA dimers and trimers MIFP March Meeting (2011) Rome Tight binding parameters for charge transport along DNA MSS-12 (2005) Albuquerque A small polaron hopping model for the multiphonon-assisted transport along DNA molecules, in the presence of disorder SOUND PROPERTIES: An encyclopaedic narration, (2002-2004) Magdeburg part1 part2 part3 part4